I am assuming you have followed the previous tutorials in this short series on how to manipulate Pubmed references using Python (1, 2, 3, 4, 5). We have cleaned the references and had a user select the references that are to be kept. These files are now located in refs_keep.txt. The last thing that we have to do is extract

I am assuming you have followed the previous tutorials in this short series on how to manipulate Pubmed references using Python (1, 2, 3, 4). We have cleaned up the references by removing unwanted fields and ensuring sections like the abstract are not split over multiple lines. The cleaned references are saved in a text file cleaned_pubmed_refs.txt. We are now

I am assuming you have followed the previous tutorials in this short series on how to manipulate Pubmed references using Python (1, 2, 3). You should have a list variable called refs4 in your Python console that contains the cleaned references. Because we will be working with this cleaned version of the references from now on, it would be a

I am assuming you have followed the first and second tutorial in this short series. You should now have a list variable called refs2 in your Python console. If you inspected the first item in refs2 list, you will notice that it specifies the journal, volume and page information for the first reference. 1 ‘1. J Neurosci. 2015 Dec 9;35(49):16159-70.